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Entry information : CclAPx02 (clementine0.9_010593m)
Entry ID 9158
Creation 2011-06-25 (Qiang Li)
Last sequence changes 2012-01-04 (Qiang Li)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-12-05 (Qiang Li)
Peroxidase information: CclAPx02 (clementine0.9_010593m)
Name (synonym) CclAPx02 (clementine0.9_010593m)
Class Ascorbate peroxidase    [Orthogroup: APx2002]
Taxonomy Eukaryota Viridiplantae Streptophyta Rutaceae Citrus
Organism Citrus clementina    [TaxId: 85681 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CclAPx02
start..stop		 S start..stop
CsAPx05 801 0 1..395 1..393
VvAPx06 676 0 27..395 40..424
GmAPx07 669 0 27..395 54..432
InAPx06 661 0 7..395 20..423
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9158' 'complement(join(146899..147051,147356..147421,147924..148028,148109..148186,148289..148363,148528..148614,148697..148764,149707..149794,149879..149979,150052..150172,150427..150561,150654..150686,150744..150821))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 150744..150821 76 N° 2 150654..150686 31 N° 3 150427..150561 133 N° 4 150052..150172 119
N° 5 149879..149979 99 N° 6 149707..149794 86 N° 7 148697..148764 66 N° 8 148528..148614 85
N° 9 148289..148363 73 N° 10 148109..148186 76 N° 11 147924..148028 103 N° 12 147356..147421 64
N° 13 146899..147051 151  
complement(join(146899..147051,147356..147421,147924..148028,148109..148186,1482 89..148363,148528..148614,148697..148764,149707..149794,149879..149979,150052..1 50172,150427..150561,150654..150686,150744..150821))


exon

Literature and cross-references CclAPx02 (clementine0.9_010593m)
DNA ref. Phytozome 12:   scaffold_34 (150821..146899)
Protein sequence: CclAPx02 (clementine0.9_010593m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   395
PWM (Da):   %s   42917.91 Transmb domain:   %s   o375-394i
PI (pH):   %s   7.88
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MASSLSTAASSRLLCSTTAAAAAAAKKCLRFSPLISQRRSSVNRGYSTVATTKCAASDPDQLKSAREDIRELLKSTFCHPILVRLGWHDAGTYDKNIEEWPRRGGANASLRFEVELKHAA
NAGLVNALKLIQPIKDKYSGVTYADLFQLASATAIEAGGPKIPMKYGRVDVSGPEQCPEEGRLPAAGPPSPAEHLRNVFYRMGLNDEIVALSGAHTVGRSRPERSGWGKPETKYTKDGPG
APGGQSWTVQWLKFDNSYFKDIKERRDEDLLVLPTDAVLFEDPSFKVYAEKYAEDQEAFFKDYAEAHAKLSNLGAKFDPPEGIVLDDGAAPEKFVAAKYSSGKSELSEAMKQKIRAEYEA
VGGSPDTPLRSNYFLNIMIVVAVLALLTSLFGN*

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCCTCTTTGAGCACCGCCGCTTCTTCTCGCCTTCTTTGCTCCACCACCGCCGCCGCCGCCGCAGCTGCTAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAAAAATGCCTCAGATTCTCTCCTCTCATCAGCCAGGTAACTTTTATCGAGTGTGTTTTTTTTATTCTATTTTGTATTTTCTTTTGCCGTAACATGTAGTTTTATC
TTCTTTTTTTTTGGGATTGCAGAGAGGAGATCGTCTGTGAACAGAGGATATAGCACCGTAGCTACGACGAAATGTGCGGCGTCGGATCCTGATCAGTTGAAGAGTGCTAGAGAAGATATT
AGGGAGCTTCTCAAGTCTACATTTTGCCATCCTATTTTGGTACATATGCGAATGTGAACCCTCTTTGAATTTCTGAATTGCATTATTGATGTGCTGTCTTTGTTAGTTTGGAGATAGAAG
TTTTGGAATTGAATTTTTGTGAAAACTCAATGTTTAGTTCTATAATTAACATTGCGCAAGAATGAAAAATAAAGCGTATACTGACCAAGTCTAGTTAATGAAATGGAACTATTCAGTAGT
TTTAAGTGTTTACAGCTTCTTGTGTATGATGATATTAATAACAGTAATAACAGGTGTTCGTCTAGGATGGCATGATGCTGGTACTTATGACAAGAACATTGAGGAGTGGCCTCGAAGGGG
AGGAGCTAATGCAAGTCTTAGATTTGAGGTTGAGCTAAAACACGCAGCCAATGCTGGTAATGATATGAACATTTTTGTGTAATTGAGCTTGTTTTGAAGATTTGGCACCTCACAACCTTG
CATTTCAGGGGGCTTGTGAATGCATTGAAACTGATTCAACCTATCAAGGACAAATATTCCGGTGTCACATATGCTGACTTATTCCAGTTGGCTAGCGCTACTGCTATAGAGGTCTGACTG
ACTCTTATTTTGGAATTAATATGATTTCAATTAATTTGATCGACTAAAGGTTCTATCAATTTCTCTGAAATTCAGGAGAAGCCGGGGGTCCTAAGATCCCAATGAAGTATGGAAGAGTGG
ATGTCTCAGGACCTGAGCAGTGCCCTGAAGAAGGAAGGCTTCCCGGTAAATACACCTTTGATGTTTATAGAATTTGGCTTGGTATATTTTACCATGGCGCCTACATTAAACAAAATAACA
GTTACTGTGCAGCTGTTTGTATCATGGATTATTCGTAGAAATTTTGTTGATTGATTGCTTGAGCATATGAACTTGTCGTGTCTGGTGTAGGACAATCTTTTCTATGAGAATCTTGTTGAT
ATCTTGGGGACTGAGGAGTGTAATTTGGTTAATTCAAAGTTTATCTCTGTTGTTCTTTGATGTAGGAGTGAACTTGTCTTGTCTGGTGTAGGAAAATCTTTTCTATGAGAATCTTGTTGA
CATCTTGGGGACTGAGGAGTGTAATTTGGTTAATTCAAAGTTTATCTCTGTTGTTCTTTGATGTGTGTTTGATAGTATAGAGGCCAAGCAATATTATTCATGGCATGAGGTTTATGTATG
TGCTCAGACACATGTTTATACATTTGTGTGGATTGAGTGAGAAATATACTTAAGACACTTTGGTGGTTTGAAAAAGNNNNNNNNNNNNNNNNNNNNNNAAGTTGTATATTGAAGGTTTAT
ATCTGCTGACATTTTGGCAATTAATTGCTTAATGTGCTTGCAGCTCCATGACCTTGTCTATTCTCTGATGTATAATTTTGTGAGCATGATATCTACAGTTTTATGGATTAGATGAGTATG
AGTAGCTGTTTCCCCCCATACTGGCGAATTTTGAAGTGTATGGTTGACTTTGTTTATTCTCCGATGTATAATTTTGTCAGTATAATGTCTACTGTTTTATGGATTAGATGAGTATTGAGT
AGCTGTTTCCCCTCATACTGGTGAATTTTGAAGTGTATGGTTGAGTTGTAGTTATTTGTGGTTTTTGTTTTCTTTCCCCTGCTTTTTTTCACACTTCGTCTTAAATGACCACACAACTAA
ATTTTGAAGTACTCATTTGGCATACAGCTCTGCTGGGCCTCCATCACCTGCTGAACATTTAAGAAATGTCTTTTATAGAATGGGATTAAATGACAAGGTAAGATAAACTGTAGGAATACT
TGGTTTTTCTTTTACCTCAATAGGTTGTGATGTTTATTAAATAGTTCTTTGATCTGCAGGAGAAATAGTTGCCTTATCTGGTGCACACACAGTGGGAAGGTCTAGACCTGAACGAAGTGG
TTGGGGCAAGCCAGAAACAAAGTACACGGTAAAAAGCCTCTTTAGTTGTTTGGGAGGTACCATAGAGAACCTTTCTAGTACTTCCTCTGAATTGTTTACTTCTGGATGACTCTACAATCT
GATAATTATCTGCTACAGAGAATATAGCTATAGCAAGCAGCTAATTATTTAAGAAAATATATTGCATGACAGAAAAAGATGGACCAGGAGCACCTGGTGGGCAGTCCTGGACGGTACAAT
GGTTGAAATTTGACAACTCCTACTTCAAGGTTTGAAGTCAGAACACTGTCTCTTCATATGCATCTGCTATAGTGAGAAATAGAGGGGATAAGTAAAAGCATATTCCGCTTGCTGACTGAT
TTATCTAACAGGAGATATTAAAGAAAGAAGGGACGAAGATTTACTCGTTCTGCCTACTGATGCTGTTCTTTTTGAAGATCCTTCATTCAAGGTAAATATTAACGAGATCTTAGTGTAAGA
TGGTGAAGTAGAATCATCATTTATAGCTAATAAACTTGGCGTAATTTACAGGTGTTTATGCTGAGAAATATGCTGAGGATCAGGAAGCATTCTTTAAGGATTATGCTGAAGCCCATGCCA
AACTCAGCAACCTTGGGGCAAAATTTGACCCTCCTGAGGTATGTTAAGACTGCTTGTGTTAAGTGCTAATGTCAATGCAGCTTTTCTTTTGACCAGAAACACTCTGTCGTTGTTCCTGAA
AATTTTGAAAACATCCGGATTGAAGAAATTTTTTTATTGTATTTAACTTATGAACTCATATTTTTCTCTTGCGAGATAGTTCAATTGGTTCTGTTATTGGCATTTATTTGAATAATTTTC
ATAATATTTGGAATAGCTCAGATGAGTTTTCTTACAAACAAGCATATTTAGAGTGCCAAATAACTGCACATTTATCAATATTGCGTTTCTGGCTGAAAATGCCAAGTGAAATTTTAGTCT
TTCTGTACTCTTCGGGCACGTGCATGACTGCATATTACCGTCTCCAATTATTGGCATCAGCTGACAATCAGGATTTGACTTGTTAACTTTTACGGAATCTGCATCAATAAATCTGTTGTG
GAAGATTATGGTAAAAGAGATTAGTAATCTTTTAAACTGATTGTTGAATTTGGTGATCAGGGGGTATCGTGCTAGATGATGGTGCTGCTCCAGAGAAGTTTGTAGCAGCCAAGTATTCGT
CCGGAAAGGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTAGTTAATAGTAGTTGAAAATTCCTTGCATTTTTTATTTCCATAGTAATCGAGCTTGTGTATGTGCAAAATGT
TTATCTTTTATACTCTTTATGATTTGATGCAGGACTGAAAAAACAAGTAACTTTGTTTTCTTGTGCCGTATGTTATAATAATACAAGATGAAGGTTTTTTGAAATCCTGTGTGTGCTTCA
CATCTAAAACTTGGAAGTCTAAGTGAAGGTGAAAGAATAAAATTCAATTAGTGTTGGCTATTTGAATTGCAGAGAGTGAGCTGTCAGAGGCTATGAAGCAGAAGATACGGGCAGAGTATG
AAGCCGTTGGTGGAAGCCCAGATACACCTCTACGGTCAAACTATTTCCTGAATATTATGATTGTGGTTGCTGTTTTGGCACTTTTGACATCTCTCTTTGGAAATTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCTTCCTCTTTGAGCACCGCCGCTTCTTCTCGCCTTCTTTGCTCCACCACCGCCGCCGCCGCCGCAGCTGCTAAGAAATGCCTCAGATTCTCTCCTCTCATCAGCCAGAGGAGATCG
TCTGTGAACAGAGGATATAGCACCGTAGCTACGACGAAATGTGCGGCGTCGGATCCTGATCAGTTGAAGAGTGCTAGAGAAGATATTAGGGAGCTTCTCAAGTCTACATTTTGCCATCCT
ATTTTGGTTCGTCTAGGATGGCATGATGCTGGTACTTATGACAAGAACATTGAGGAGTGGCCTCGAAGGGGAGGAGCTAATGCAAGTCTTAGATTTGAGGTTGAGCTAAAACACGCAGCC
AATGCTGGGCTTGTGAATGCATTGAAACTGATTCAACCTATCAAGGACAAATATTCCGGTGTCACATATGCTGACTTATTCCAGTTGGCTAGCGCTACTGCTATAGAGGAAGCCGGGGGT
CCTAAGATCCCAATGAAGTATGGAAGAGTGGATGTCTCAGGACCTGAGCAGTGCCCTGAAGAAGGAAGGCTTCCCGCTGCTGGGCCTCCATCACCTGCTGAACATTTAAGAAATGTCTTT
TATAGAATGGGATTAAATGACAAGGAAATAGTTGCCTTATCTGGTGCACACACAGTGGGAAGGTCTAGACCTGAACGAAGTGGTTGGGGCAAGCCAGAAACAAAGTACACGAAAGATGGA
CCAGGAGCACCTGGTGGGCAGTCCTGGACGGTACAATGGTTGAAATTTGACAACTCCTACTTCAAGGATATTAAAGAAAGAAGGGACGAAGATTTACTCGTTCTGCCTACTGATGCTGTT
CTTTTTGAAGATCCTTCATTCAAGGTTTATGCTGAGAAATATGCTGAGGATCAGGAAGCATTCTTTAAGGATTATGCTGAAGCCCATGCCAAACTCAGCAACCTTGGGGCAAAATTTGAC
CCTCCTGAGGGTATCGTGCTAGATGATGGTGCTGCTCCAGAGAAGTTTGTAGCAGCCAAGTATTCGTCCGGAAAGAGTGAGCTGTCAGAGGCTATGAAGCAGAAGATACGGGCAGAGTAT
GAAGCCGTTGGTGGAAGCCCAGATACACCTCTACGGTCAAACTATTTCCTGAATATTATGATTGTGGTTGCTGTTTTGGCACTTTTGACATCTCTCTTTGGAAATTAG

Retrieve as FASTA