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Entry information : RcPrx78 (30190.m011144)
Entry ID 9400
Creation 2011-06-30 (Qiang Li)
Last sequence changes 2011-10-03 (Qiang Li)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2012-01-04 (Qiang LI)
Peroxidase information: RcPrx78 (30190.m011144)
Name (synonym) RcPrx78 (30190.m011144)
Class Class III peroxidase    [Orthogroup: Prx276]
Taxonomy Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus
Organism Ricinus communis    [TaxId: 3988 ]
Cellular localisation N/D
Tissue type
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RcPrx78
start..stop		 S start..stop
RcPrx82 615 0 1..327 1..324
RcPrx79 441 3.17e-157 1..327 1..323
MePrx29 387 7.36e-136 9..327 10..325
MePrx116 370 8.02e-129 1..327 1..326
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9400' 'complement(join(2165747..2166141,2166317..2166480,2166593..2166789,2166900..2167124))' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2166900..2167124 223 N° 2 2166593..2166789 195 N° 3 2166317..2166480 162 N° 4 2165747..2166141 393
complement(join(2165747..2166141,2166317..2166480,2166593..2166789,2166900..2167 124))


exon

Literature and cross-references RcPrx78 (30190.m011144)
DNA ref. Phytozome 12:   30190 (2167124..2165747)
Protein sequence: RcPrx78 (30190.m011144)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   327 (300)
PWM (Da):   %s   35153.19 (32264.8)  
PI (pH):   %s   4.53 (4.53) Peptide Signal:   %s   cut: 28 range:28-327
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MTSNSSSGFMIFTVFLIISPCLLPCQAQLSDESFYDETCPRALSI
IRGRISAAVASELRMAASLIRLHFHDCFVQGCDASILLNDAQGERSSISNANSVRGFEVIEAIKAELEEQCAQTVSCADIVAVAAGDASVAESNFHGPTWPVKLGRLDSPTAAPVADADANLPRFDNTLPQLITFFSRKGFNERELVALG
AHTFGRAKCFFFRDRVNGNGNDIDAGFARTIVDTVPCPGDGSGDDNLGNLDFFTPETWDNRYFMNLIENRGLLASDQALHSGGSTDSIVEEYAINGARFRSDFAAAMIKMGDLPPPNGLQ
GQIRRVCSVP

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTTCTAATTCATCTTCTGGTTTCATGATTTTCACAGTATTTCTTATTATTTCCCCTTGCTTATTGCCGTGTCAAGCACAGCTTTCTGATGAAAGCTTCTATGACGAGACTTGTCCT
CGTGCCCTGAGCATTATAAGGGGACGTATTAGTGCAGCCGTTGCGAGTGAACTCAGAATGGCTGCTTCGCTCATTCGCCTTCATTTCCATGATTGCTTTGTCCAGGTTAATATACTTTAT
AAATCTATATATTTATAATTACTGTGTGTGCATGCAAAAGGGAGATTGTAATCTTAAAGATTAAAATCTATTAATTGTAAATTATCGCATTTCAGGGGGTTGTGATGCATCAATCCTGTT
GAATGATGCACAAGGCGAAAGGAGTTCAATCAGTAATGCCAACTCCGTCAGAGGATTTGAAGTCATTGAGGCTATCAAGGCTGAATTAGAGGAGCAATGTGCCCAAACTGTTTCATGTGC
TGACATAGTTGCAGTAGCAGCTGGTGATGCATCCGTTGCTGAAAGTAACTTTCAGTTAGTAATCTTCAAATCCTTTTTAGCAGTATGTGCTGCTTTTATTAGCTGACAATGCGCAATCTA
AATGTAAATATTTCGTAATATGATCTCTTCATACATAACAGGTTAGTGTGGACCGACTTGGCCAGTGAAGCTTGGAAGATTAGACTCTCCTACAGCTGCACCCGTAGCTGATGCCGATGC
CAACCTTCCCCGCTTTGATAATACTCTCCCCCAACTGATAACATTCTTCAGTCGCAAGGGATTTAATGAAAGAGAATTGGTTGCCCTTTCAGGTATGTACTTGAATAACTCTTAATCTGT
TTCTTCTTTGGGATTAATTTCTACTATATGAATTACATAAACTTCGAGATTGTCTCCAAAGACTCTAATTACAAGTTCGAACTTCAATTCTACCCAAAGACCATAAAAGGCTAAAGTCTT
CGTTAATTAATTGGGATTTATATGCAGGAGAGCGCATACATTTGGACGAGCAAAATGCTTTTTCTTCCGTGACAGGGTCAACGGCAATGGAAATGATATTGATGCTGGATTTGCCAGAAC
TATAGTGGACACAGTTCCTTGTCCTGGTGATGGGTCAGGGGATGACAACCTTGGAAACCTCGACTTTTTCACTCCTGAAACTTGGGATAACAGGTACTTCATGAATCTTATTGAAAATAG
AGGCCTTCTTGCATCAGACCAGGCACTTCACAGCGGCGGATCCACTGACAGCATCGTTGAAGAGTATGCCATTAACGGAGCAAGGTTCAGGTCTGATTTTGCAGCTGCCATGATAAAGAT
GGGAGATTTACCCCCTCCAAATGGTTTGCAAGGCCAGATACGAAGGGTCTGCAGTGTTCCTAAT

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGACTTCTAATTCATCTTCTGGTTTCATGATTTTCACAGTATTTCTTATTATTTCCCCTTGCTTATTGCCGTGTCAAGCACAGCTTTCTGATGAAAGCTTCTATGACGAGACTTGTCCT
CGTGCCCTGAGCATTATAAGGGGACGTATTAGTGCAGCCGTTGCGAGTGAACTCAGAATGGCTGCTTCGCTCATTCGCCTTCATTTCCATGATTGCTTTGTCCAGGGTTGTGATGCATCA
ATCCTGTTGAATGATGCACAAGGCGAAAGGAGTTCAATCAGTAATGCCAACTCCGTCAGAGGATTTGAAGTCATTGAGGCTATCAAGGCTGAATTAGAGGAGCAATGTGCCCAAACTGTT
TCATGTGCTGACATAGTTGCAGTAGCAGCTGGTGATGCATCCGTTGCTGAAAGTAACTTTCATGGACCGACTTGGCCAGTGAAGCTTGGAAGATTAGACTCTCCTACAGCTGCACCCGTA
GCTGATGCCGATGCCAACCTTCCCCGCTTTGATAATACTCTCCCCCAACTGATAACATTCTTCAGTCGCAAGGGATTTAATGAAAGAGAATTGGTTGCCCTTTCAGGAGCGCATACATTT
GGACGAGCAAAATGCTTTTTCTTCCGTGACAGGGTCAACGGCAATGGAAATGATATTGATGCTGGATTTGCCAGAACTATAGTGGACACAGTTCCTTGTCCTGGTGATGGGTCAGGGGAT
GACAACCTTGGAAACCTCGACTTTTTCACTCCTGAAACTTGGGATAACAGGTACTTCATGAATCTTATTGAAAATAGAGGCCTTCTTGCATCAGACCAGGCACTTCACAGCGGCGGATCC
ACTGACAGCATCGTTGAAGAGTATGCCATTAACGGAGCAAGGTTCAGGTCTGATTTTGCAGCTGCCATGATAAAGATGGGAGATTTACCCCCTCCAAATGGTTTGCAAGGCCAGATACGA
AGGGTCTGCAGTGTTCCTAAT

Retrieve as FASTA