View Redoxidase 9401

Entry information : RcPrx79 (30190.m011145)

Entry ID	9401
Creation	2011-06-30 (Qiang Li)
Last sequence changes	2011-10-03 (Qiang Li)
Sequence status	complete
Reviewer	Qiang Li
Last annotation changes	2012-01-04 (Qiang LI)

Peroxidase information: RcPrx79 (30190.m011145)

Name (synonym)

RcPrx79 (30190.m011145)

Class

Class III peroxidase [Orthogroup: Prx276]

Taxonomy

Eukaryota Viridiplantae Streptophyta Euphorbiaceae Ricinus

Organism

Ricinus communis [TaxId: 3988 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	RcPrx79 start..stop	S start..stop
RcPrx82	480	1.86e-172	1..323	1..324
RcPrx78	479	5.54e-172	10..323	10..327
MePrx29	389	9.79e-137	1..323	1..325
RcPrx85	377	7.26e-132	1..323	1..320

Gene structure Fichier

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	2169482..2169700	217	N° 2	2169794..2169976	181	N° 3	2170140..2170308	167	N° 4	2170484..2170881	396
join(2169482..2169700,2169794..2169976,2170140..2170308,2170484..2170881)

Literature and cross-references RcPrx79 (30190.m011145)

DNA ref.	Phytozome 12: 30190 (2169482..2170881)

Protein sequence: RcPrx79 (30190.m011145)

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	323 (298)
PWM (Da):	34918.19 (32202.9)
PI (pH):	5.03 (4.90)	Peptide Signal:	cut: 26 range:26-323

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MACRLSVTCLVFAISLMTCLWACQAQLSDESFYNQRCPTALSIIR
GGISAAVARELRMAASLIRLHFHDCFVGGCDASILLDDPQGERSSISNANSVRGFEVIEAIKADLERQCPQTVSCADIVAVAARDASVAVSGPTWSVKLGRLDSPTAATAAQADANLPRFDNTLAQLRGFFNPKGFSDREMVALSGAH
TFGRAKCFFYRNRVNGNGNNIDAGFARLIRDTVPCPADGSGDENLGDLDALTPETWDNRYFRNLIERKGLLQSDQELYSGGSTNSIVEEYDRDVSIFRSDFASAMVKMADLNPITDPNVG
QIRRICSAA

Retrieve as FASTA

Remarks

Complete sequence from genomic.

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCTTGTCGTTTATCCGTTACTTGTTTGGTTTTCGCAATATCATTAATGACTTGCTTATGGGCATGTCAAGCACAGCTTTCTGATGAAAGCTTCTATAACCAGAGATGTCCTACTGCC
CTGAGCATTATAAGGGGAGGTATTAGTGCAGCTGTTGCGCGTGAGCTGAGAATGGCTGCTTCGCTTATTCGCCTGCATTTCCATGATTGCTTTGTTGGGGGGTAAACACGCTATTTATAT
GTGCACATAACACAAAGACTCTATTTAATATATGCTGACTGCTAATTAGTTATAATTATGAACTCGAATTTCAGGGTTGTGATGCCTCAATCTTGCTGGATGATCCACAAGGCGAGAGGA
GTTCAATCAGTAATGCCAACTCTGTCAGGGGATTTGAAGTAATTGAGGCTATCAAGGCTGACCTTGAGAGACAATGTCCGCAGACTGTTTCATGTGCTGATATAGTTGCAGTAGCAGCTC
GCGATGCATCTGTTGCTCTGTAAGTAACCTTCATTGAGTAAATAATGATCAAATCTTTATGATTATCGACAAGAAGTTAGTTTTCTTAGCTGACAATATTAATAGTAATAATAGTAGCAT
GAGCGATCTAAATATTATTTTAATATATATATATGATCTTTTCATATATATGTACAAATCAGGTTAGTGGACCAACATGGTCAGTAAAGCTTGGAAGATTGGACTCCCCCACTGCTGCAA
CTGCAGCCCAAGCTGATGCCAATCTTCCTCGATTTGATAATACTCTCGCTCAACTTAGGGGATTCTTCAATCCCAAGGGTTTCTCAGACAGAGAAATGGTTGCCCTTTCAGAGGTAATTT
AAGCATCGATAGAAATATTATTTCCTCGGTTAATTTCTTTTTTGGTTAACTTGGCTTCTGACTAGGTTCGAAATAGAAATTTTATAGCCTGAACAGAACTCTAGTATCACTGAAACTAAC
CATGTGAAGTACAGTAAGATGGCTAAATATTTCATTAATTAAATGCAGGAGCACATACATTTGGCAGAGCAAAATGTTTTTTCTACCGCAACAGGGTGAACGGCAATGGAAATAATATCG
ATGCTGGATTTGCTCGTCTGATAAGAGATACAGTTCCTTGTCCAGCTGATGGCTCAGGGGACGAAAACCTTGGCGACCTTGACGCGTTGACTCCTGAAACTTGGGATAATAGATACTTCA
GAAATCTTATCGAAAGAAAGGGCCTTCTTCAATCTGACCAGGAACTTTATAGTGGTGGATCAACAAACAGCATTGTCGAAGAGTATGATAGAGATGTTTCAATCTTCAGGTCTGATTTTG
CGTCTGCCATGGTAAAGATGGCAGATTTAAACCCAATAACTGATCCTAATGTTGGGCAGATAAGAAGGATTTGCAGTGCTGCTAAC

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA