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Entry information : TsAPx03-1B(Thhalv10023023m )
Entry ID 9830
Creation 2011-11-18 (Qiang Li)
Last sequence changes 2011-11-29 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2023-05-06 (Christophe Dunand)
Peroxidase information: TsAPx03-1B(Thhalv10023023m )
Name TsAPx03-1B(Thhalv10023023m )
Class Ascorbate peroxidase     [Orthogroup: APx013]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Eutrema
Organism Thellungiella salsuginea (Eutrema salsugineum)    [TaxId: 72664 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value TsAPx03-1B
start..stop		 S start..stop
TsAPx03-1C 482 4.03e-174 1..283 1..282
AlyAPx23-2 471 1.34e-169 2..283 4..286
CrubAPx03-2 469 4.03e-169 3..283 4..284
AlyAPx23 455 1.43e-163 1..283 1..286
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9830' 'join(2879869..2879981,2880136..2880268,2880706..2880755,2881330..2881398,2881490..2881538,2881745..2881827,2881921..2882009,2882120..2882225,2882395..2882514,2882566..2882682)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 2879869..2879981 111 N° 2 2880136..2880268 131 N° 3 2880706..2880755 48 N° 4 2881330..2881398 67
N° 5 2881490..2881538 47 N° 6 2881745..2881827 81 N° 7 2881921..2882009 87 N° 8 2882120..2882225 104
N° 9 2882395..2882514 118 N° 10 2882566..2882682 115  
join(2879869..2879981,2880136..2880268,2880706..2880755,2881330..2881398,2881490 ..2881538,2881745..2881827,2881921..2882009,2882120..2882225,2882395..2882514,28 82566..2882682)


exon

Literature and cross-references TsAPx03-1B(Thhalv10023023m )
DNA ref. Phytozome 12:   scaffold_11 (2879869..2882682)
Protein sequence: TsAPx03-1B(Thhalv10023023m )
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   303
PWM (Da):   %s   33411.86  
PI (pH):   %s   5.14
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVSLVVGAEYLKQIDKARRELRAVIAQKNCAPIMLRLSWHDAGTYDAKSNTGRPIGSIRNEEEYTHGANNGLKVALDLCEDVKSKLPKISYADLYQQLAGVVAVEVTGGPDISFIPGRKD
SNACTDEGRLPDANQGFKHLKDVFYRMGLSDKDIVALSGAHTLGRAHPERSGFDGPWTQDPLKFDNSYFVKLLKEEESEILLKLSNDKTLLEVPEFRHYAELYAKEEDAFFRDYAESHKK
LSELGFTPTSSVTKETTESTKLSISKLGVAVAAALVACSYFSERNASSSDLFGYDGEDFVDLV

Retrieve as FASTA  
Remarks Complete sequence from genomic. Incorrect prediction from phytozome (3' end is missing; Short PS in frame is missing which has been completed). No EST.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGTCACTCGTCGTTGGCGCGGAGTACCTTAAGCAGATCGATAAAGCTCGCCGTGAACTCCGTGCTGTTATCGCTCAGAAGAATTGCGCTCCGATCATGCTCCGATTATCTCGTAAG
TTTCCATTTCTGTCGTCTTATTTCGCGATTCCCTGGTGCTGAGCGCGACGAGGTTTATTTCCTGTGGAAATTTGAGAAAATCTCGCGCTATTTTGGAATATTGCTTACTGCATTTGCGAT
CTCATGTTTGTCTTCTCTGGTTTGTTAAGGTGGCATGATGCTGGAACCTACGATGCCAAATCGAACACCGGTAGACCTATTGGCTCGATTAGGAACGAAGAAGACTANGAAGAGTACACT
CATGGTGCCAATAATGGTTTGAAAGTTGCTCTCGATCTCTGTGTGGTGCGTTTTTCTTTTTTCCATTCTCTGCGGATTTGAAGATTCGAGTGGAAAATCGATTTAGGGATTTCGTTTCCT
AGCTTGTCTATGCAGTCTTTGTTTGCACTAAACTGTTTATAGGAGACGAGAATTTCCTCATTTGGAACCCTATATAATATCGATTTCGAAATCTTTCTAAATATACGTTATCGTTTGAAA
CATTGACCTTAATAGGATTTTGTGTTGCCTATGTTTCTCCCGGATCGTTCTTTTCAGTAGTCCTGAGGATTTATGAGAAGTTTCACATGTTAAATCTGTTAGTGTGTGCCTTATATGCTT
ATCAGTTTCAGAAACCTTTCCCTTTGTTCTCATGTGGTGTATCATGTTGTCTTATGACTTGGGAACAAAAGTTTCATAATCGGCTTATGTGGATTTTGATGTTGATTCTTTAATTTTTTC
AGAGGACGTGAAAACTAAATTTCCCAAGATCAGCTATGCGGACCTATACCACAGGTAAACTAAAACGAATTTTGCTTGAAGTTTTATGTTTGCATAAATGTTCCTACTGGATTTAAGACT
GTAAACAAATGCTTCTTATAGTATCATTTCGCACCTTATTTTTTTGTGCTCTTTCTTCTGATTGTCCTGTGACTTTTAACTTGTTGTGTCTCATAAACTATCAAAAGCGTTGTTAGATAT
TTTTTTGAGCTGTACTTGTATGATTGCTGTCCGCAGGCTCAGGATAAATAAGTTTTGTTGTTGAAATGTTTGGCTTATTTGCAATTTGAAGAATCTTCACACTCACTCACATGAACAATA
ATAGTCTTTTTTGTATTCTCTGGCTTTCACAATTGTTCTTTCAAGTAAAGTATATAGATAGAGTCACAGTTATGGAGGAAGCTTAACAAAAAAAAAAGTGCCACTTGATCTTTGACTATA
GTAAACAAATCCTGCATTTAGCTGTGTCAATAAGGTTGCGTAATAATTTCTACTAGTGGCACTCAACTATTTCACTCATCAAATTATTCTATTTAGCCCTGGACTTAATGGACCTTACAT
TTCACTCGAAGTTGCTTCTGTCATTTTTCAGCTTGCGGGTGTGGTAGCGGTTGAAGTTACTGGTGGACCTGACATCAGCTTTATTCCTGGAAGAAAAAAGTAATATTCTCTCAGCCACTA
AGATGAATAGTATTACAGCTTACCGCCAAATGCAATTTAACAATATAAGCTGTATGTTTCTCACTTATAGGATTCAAATGCCTGCACCGACGAAGGAAGACTTCCTGATGCTAATCAAAA
GGTAGGATGAAAGTTTTGTTTTCAAATAATCACAAACTCCTAAGTATTTTACTGAAAATTAAATACCTGACGTTTGTATCTGAGTGGCAAAGATAGAATGGAAGATGATCATCTAGGTGT
TTCCCCAATGTATAATATAATCATCTATTTGAATGTATATCTTTTCTCAGTGAGTGATCAAAGTTATGTCTCTAATTTTGCACCTAGGTTTCAAACATCTTAAAGATGTCTTCTACCGTA
TGGGACTGTCTGATAAAGATATCGTGGCACTCTCAGGGGCTCATACTCTCTGGTAAATTCTTTGTTTCGTCATTCCACATTTTTCATTTGGTATTTGATAAATAAGTTGTATATTGGTTT
TGTTTAATTAGATTCCGATGTTTAGGGAAGGGCTCATCCAGAGAGATCAGGTTTTGATGGACCATGGACTCAAGTCACTCAAGACCCTCTTAAGTTCGATAACTCATACTTTGTGTGTAA
GATCCTCTAAATTCGTGGACACTTGTTTTTTTTTTTTGGTATTGGGACGACAAATATTACTTCTGACTACTGAATTGTTTACATCCAATATCGCTGCTGGTACCAGGAAATTGCTGAAAG
AAGAAGAATCAGAGATATTGCTGAAACTTTCTAACGACAAGACTTTGTTGGAGGTCCCGGAGTTTCGTCATTACGCTGAGCTTTACGCAAAAAGGTGAAAATTATGAGAGCCTGCCTTTA
TTCTGATCCAAAGATCTGATTCAATTATCAATCCTGGAGCTGCAAAACGAGTTTTATAATGACAAGCCAAGATTGTGTTGCAAGTAGCATCTTGATTTGCTCTTGTTAACAACTGTATAA
GTTTCCAATTTCGTCCCAAACAGGAAGAAGATGCTTTCTTCAGAGACTATGCGGAGTCACACAAGAAACTCTCAGAGCTCGGGTTCACACCAACTTCTTCAGTCACCAAGGAGACAACAG
AGAGCACCAAGCTGTCCATATCTCTCTGGGACTAGAACTTCCATCTTACAAGATAACTCTGAAACTTAAACTTACAAAGCTCGGAGTCGCAGTCGCTGCTGCTTTGGTGGCTTGTAGCTA
CTTCTCTGAAAGAAACGCTTCCTCTTCCGATCTCTTTGGATATGATGGTGAAGATTTTGTTGATCTAGTATG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGTGTCACTCGTCGTTGGCGCGGAGTACCTTAAGCAGATCGATAAAGCTCGCCGTGAACTCCGTGCTGTTATCGCTCAGAAGAATTGCGCTCCGATCATGCTCCGATTATCGTGGCAT
GATGCTGGAACCTACGATGCCAAATCGAACACCGGTAGACCTATTGGCTCGATTAGGAACGAAGAAGACTANGAAGAGTACACTCATGGTGCCAATAATGGTTTGAAAGTTGCTCTCGAT
CTCTGTGAGGACGTGAAAACTAAATTTCCCAAGATCAGCTATGCGGACCTATACCATCAGCTTGCGGGTGTGGTAGCGGTTGAAGTTACTGGTGGACCTGACATCAGCTTTATTCCTGGA
AGAAAGGATTCAAATGCCTGCACCGACGAAGGAAGACTTCCTGATGCTAATCAAGGTTTCAAACATCTTAAAGATGTCTTCTACCGTATGGGACTGTCTGATAAAGATATCGTGGCACTC
TCAGGGGCTCATACTCTGGGAAGGGCTCATCCAGAGAGATCAGGTTTTGATGGACCATGGACTCAAGTCACTCAAGACCCTCTTAAGTTCGATAACTCATACTTTGGGAAATTGCTGAAA
GAAGAAGAATCAGAGATATTGCTGAAACTTTCTAACGACAAGACTTTGTTGGAGGTCCCGGAGTTTCGTCATTACGCTGAGCTTTACGCAAAGGAAGAAGATGCTTTCTTCAGAGACTAT
GCGGAGTCACACAAGAAACTCTCAGAGCTCGGGTTCACACCAACTTCTTCAGTCACCAAGGAGACAACAGAGAGCACCAAGCTGTCCATATCAAAGCTCGGAGTCGCAGTCGCTGCTGCT
TTGGTGGCTTGTAGCTACTTCTCTGAAAGAAACGCTTCCTCTTCCGATCTCTTTGGATATGATGGTGAAGATTTTGTTGATCTAGTATG

Retrieve as FASTA