View Redoxidase 9922

Entry information : PcarKat02

Entry ID	9922
Creation	0000-00-00 (Christophe Dunand)
Last sequence changes	2011-12-14 (Christophe Dunand)
Sequence status	complete
Reviewer	Catherine Mathe
Last annotation changes	2015-12-11 (Catherine Mathe)

Peroxidase information: PcarKat02

Name

PcarKat02

Class

Catalase [Orthogroup: Kat003]

Taxonomy

Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete

Organism

Phanerochaete carnosa [TaxId: 231932 ]

Cellular localisation

N/D

Tissue type

N/D

Inducer

N/D

Repressor

N/D

Best BLASTp hits

Perox	score	E-value	PcarKat02 start..stop	S start..stop
PcKat02	995	0	26..541	23..554
PplKat02	706	0	17..541	39..571
PinvKat02	562	0	5..514	8..530
SbreKat02	544	0	28..514	33..530

Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '9922' 'join(3588106..3588316,3588379..3588451,3588509..3588569,3588717..3588741,3588801..3588873,3588922..3588962,3589012..3589064,3589116..3589156,3589207..3589329,3589382..3589442,3589498..3589676,3589729..3589797,3589848..3589954,3590011..3590045,3590097..3590130,3590188..3590315,3590364..3590467,3590523..3590730)'

Exons►

Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size	Exon	Start..End	Size
N° 1	3588106..3588316	209	N° 2	3588379..3588451	71	N° 3	3588509..3588569	59	N° 4	3588717..3588741	23
N° 5	3588801..3588873	71	N° 6	3588922..3588962	39	N° 7	3589012..3589064	51	N° 8	3589116..3589156	39
N° 9	3589207..3589329	121	N° 10	3589382..3589442	59	N° 11	3589498..3589676	177	N° 12	3589729..3589797	67
N° 13	3589848..3589954	105	N° 14	3590011..3590045	33	N° 15	3590097..3590130	32	N° 16	3590188..3590315	126
N° 17	3590364..3590467	102	N° 18	3590523..3590730	206
join(3588106..3588316,3588379..3588451,3588509..3588569,3588717..3588741,3588801 ..3588873,3588922..3588962,3589012..3589064,3589116..3589156,3589207..3589329,35 89382..3589442,3589498..3589676,3589729..3589797,3589848..3589954,3590011..35900 45,3590097..3590130,3590188..3590315,3590364..3590467,3590523..3590730)

Literature and cross-references PcarKat02

DNA ref.	JGI genome: scaffold_4 (3588106..3590730)

Protein sequence: PcarKat02

Sequence Properties
first value : protein
second value (mature protein)

Length (aa):	541 (519)
PWM (Da):	60300.13 (57930.8)
PI (pH):	6.28 (5.72)	Peptide Signal:	cut: 28 range:23-541

Sequence
Send to BLAST
Send to Peroxiscan

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

MARITLRRAFVSLVLVCAAARAQDAYTFDLNTGVDLQAATDAESA
PQLTFATEAGVPYTHPYDAQKIGADGPLLLQDQHIIETLAHFVRERIPERVVHAKAAGAHGYFEVTNADFNGLKTPIVRISTVGGEMGSADTARDPRGFSVKFRTRKGIWDLVMNTPVFFIRDPTKFPHFIHTQKRDPQTHLRDD
MYWDYLSSNPESLYQVMRLFSDLGTPDGVRHLNAWTGHSYRWIKADGSWVYVKLYCETMQGVQNLTNAEATAIAGSNPDYSQQDLFESIENSTYPGWIMYAQVLTPQQAETFKYNVLDLK
DWGFDDVPKTEIGRFYLTQNPVNYFAEIEQAAFSPGRTVSGWEPSTDPVLQARVFSYDAQRYRLGVNYQLPVNAPTSPVANFQRDGHMALSNQGSRPNYLSTLQKINLPPLPYIEDTHQQ
WGGAVKSLSEVTAIDFDWPQRFWKSLSEQDQTNFISNVVGHLGTVNSVSVRQRQVALFALVDPALGKAIADGVNVTVPNPLPSFPTGPTWFNTTKPATNSTLNY

Retrieve as FASTA

Remarks

Complete sequence from genomic (17 introns).

DNA ►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

ATGGCCCGCATCACTCTCCGACGCGCTTTCGTCTCACTTGTCCTGGTGTGCGCCGCCGCACGCGCCCAGGACGCGTACACCTTCGACCTGAACACCGGCGTCGACCTCCAGGCGGCGACG
GACGCAGAGTCTGCGCCGCAGCTCACGTTCGCGACCGAGGCCGGCGTGCCCTACACGCACCCGTACGACGCGCAGAAGATCGGCGCCGACGCGGTGAGTCTCCTCATGGCTGTTGCTCGT
CCGCGCGCTTCTTCTCATGCGTCACGCTTGTGCAGGGCCTCTGCTCCTCCAGGACCAGCACATCATTGAGACTCTCGCCCATTTCGTGCGTGAGCGCATACCCGAGCGCGGTGAGCTTTG
CGAGCGAGCGGTCGTCCCTTCGACGTATGCTGACTTAGGGATCAAAGTGTCGTGCACGCGAAGGCGGCTGGCGCACATGGGTACTTTGAGGTCACGAATGCGGACTTTTTGTGAAGAATT
ACACAATCATGTGCGTGAAGCTTCTGGTGTGACTGCTCCTTTTATTTATCTAAACGCCCGATAGGGACGTATTTTCGGAGGTATGTATCGCAGTATCTGGTCTCTGGAAAGTACGGCAGA
AGGTCTAATCTTCGCAGAATGGCTTGAAAACCCCTATTACAGAGGTCTGTAGCTATTCATTTCCAATCGGGCCACCCTTGTTCATTTCGCTGTACTGTACTAGTCCGCATTAGCACCGTC
GGTGGAGAGATGGGCTCTGCGGACACAGCCAGAGACCCCCGTGGCTTTTCAGTGAAAAGTGAGTTTGTTTAATAATAGTCTTGACGATGGTGCTCAAAAATGGTAGATTTCGGACGCGTA
AGGGCATCTGGGACTTGGTCATGAACACAGTAGGTCCAGACTACCTTCGTAAACTTGGTAAACGCTCACATATTGCAGACACACCCGTATTCTTTATCCGGGACCCCACGAAGTTCCCGC
ACTTCATCCACACGTTCGTGCCTCCCTTGTTTTGCGAAGTTTTAAAATGTTTATCCTCCAACAGACCCAGAAACGTGACCCGCAGACCCACTTGCGCGATCACGAGAGTATGTGCAAATT
TCTCTGCCTGAGGCATAATACTGACGGGTCTTGGTAGCATGTATTGGGACTACCTGAGCTCGAACCCCGAGTCGCTCTACCAGGTGATGCGCCTGTTCTCGGACCTGGGCACGCCTGATG
GTGTGCGGCACCTGAACGCGTGGACGGGCCATTCCTACAGAGGTATAAAGCTATTTTCCTGTAATGTTAGCGCGCGTAGCTGATGTTGGTGCAGATGGATCAAGGCCGACGGCAGCTGGG
TCTACGTCAAGCTGTACTGCGAGACGATGCAGGGTGTGTATGCGCGCCATTTTCCGTCGCCGCTAACAAGCCTCACTGACGTCCTCATGCAGGTCCAGAACTTAACTAACGCAGAGGCGA
CGGCCATCGCGGGCTCAAACCCGGACTACTCCCAACAGGACCTGTTCGAATCAATCGAGAACAGCACATACCCCGGCTGGATCATGTATGCGCAAGTACTGACACCACAGCAGGCCGAGA
CGTTCAAGTACAATGTCCTTGACCTTACCAAAAGTATGTAGCACTACCGTCTCTCCCAGTCGGGTGTGGTCTGACACACGACCAGGGACTGGGGCTTCGACGACGTGCCTAAGACCGAGA
TCGGCCGGTTCTACCTCACGCAGAACCCAGTCAAAAGTGGGTCTTCGTTTTTGATCCCGAGATCGGGTGCTGATACGATCTTACAGCTACTTTGCTGAGATCGAACAGGCGGCCTTCTCT
CCTGGACGTACCGTCTCCGGATGGGAGCCTTCGACGGATCCGGTGCTCCAAGCTCGTGTGTTCTCTTACGGGGGGGTATGGAATCCGACGTTGGGTATATTAGAGATAAGCTGAAAAATC
GCGCTCAACAGATGCACAGCGCTATCGCCTTGGCGTGAACTATATGTGGTAAGTAATTTCCCCGTGATTCAGGGCTTTCTGTTCAACATCTTGACGTAGCAACTGCCCGTCAATGCGCCA
ACGTCGCCTGTTGTGGTGCGTAGCTCTGCTTCAGGATTACATTTATTGGCGGATGCTAACGGTTTATCGCAGCCAACTTCCAGCGTGATGGACACATGGCACTCAGCAATCAAGGCTCGC
GTCCAAACTACTTGTCTACTCTGCAGAAGATCAATCTTCCACCTCTGCCGTACATCGAGGATACTCACCAACAATGGGCTCTGTAAGTTGGGACAGCATCTCTGCTTTTCTTAGCTGACA
TGCAGCGCAGGGCGGTGCTGTCAAGTCCCTGTCCGAGGTGACTGCCATCGATTTCGACTGGCCGCAGCGCTTCTGGAAGAGCCTTTCTGAGCAGGACCAGACGAACTTTATCAGAGGTAC
GCACCCTCCCCGTACATACTTATACGGATTCTAGCTGAGGCTCTTATTCAGCAACGTCGTTGGACACCTTGGCACAGTCAACAGCGTGTCTGTCCGGCAGCGCCAGGTCGCGCTCTTTGC
GCTCGTCGACCCCGCGCTCGGCAAGGCCATTGCGGATGGTGTCAACGTCACGGTGCCCAACCCCCTGCCAAGCTTCCCCACAGGGCCCACCTGGTTCAACACGACGAAGCCTGCGACCAA
CAGCACGCTGAACTATTAG

Retrieve as FASTA

CDS►
Send to BLAST

.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA