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Entry information : PcarKat02
Entry ID 9922
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2011-12-14 (Christophe Dunand)
Sequence status complete
Reviewer Catherine Mathe
Last annotation changes 2015-12-11 (Catherine Mathe)
Peroxidase information: PcarKat02
Name PcarKat02
Class Catalase    [Orthogroup: Kat003]
Taxonomy Eukaryota Fungi Basidiomycota Agaricomycetes Corticiaceae Phanerochaete
Organism Phanerochaete carnosa    [TaxId: 231932 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PcarKat02
start..stop		 S start..stop
PcKat02 995 0 26..541 23..554
PplKat02 706 0 17..541 39..571
PinvKat02 562 0 5..514 8..530
SbreKat02 544 0 28..514 33..530
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 3588106..3588316 209 N° 2 3588379..3588451 71 N° 3 3588509..3588569 59 N° 4 3588717..3588741 23
N° 5 3588801..3588873 71 N° 6 3588922..3588962 39 N° 7 3589012..3589064 51 N° 8 3589116..3589156 39
N° 9 3589207..3589329 121 N° 10 3589382..3589442 59 N° 11 3589498..3589676 177 N° 12 3589729..3589797 67
N° 13 3589848..3589954 105 N° 14 3590011..3590045 33 N° 15 3590097..3590130 32 N° 16 3590188..3590315 126
N° 17 3590364..3590467 102 N° 18 3590523..3590730 206  
join(3588106..3588316,3588379..3588451,3588509..3588569,3588717..3588741,3588801 ..3588873,3588922..3588962,3589012..3589064,3589116..3589156,3589207..3589329,35 89382..3589442,3589498..3589676,3589729..3589797,3589848..3589954,3590011..35900 45,3590097..3590130,3590188..3590315,3590364..3590467,3590523..3590730)


exon

Literature and cross-references PcarKat02
DNA ref. JGI genome:   scaffold_4 (3588106..3590730)
Protein sequence: PcarKat02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   541 (519)
PWM (Da):   %s   60300.13 (57930.8) Transmb domain:   %s   o292-311i433-455o475-497i596-613o
PI (pH):   %s   6.28 (5.72) Peptide Signal:   %s   cut: 28 range:23-541
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MARITLRRAFVSLVLVCAAARAQDAYTFDLNTGVDLQAATDAESA
PQLTFATEAGVPYTHPYDAQKIGADGPLLLQDQHIIETLAHFVRERIPERVVHAKAAGAHGYFEVTNADFNGLKTPIVRISTVGGEMGSADTARDPRGFSVKFRTRKGIWDLVMNTPVFFIRDPTKFPHFIHTQKRDPQTHLRDD
MYWDYLSSNPESLYQVMRLFSDLGTPDGVRHLNAWTGHSYRWIKADGSWVYVKLYCETMQGVQNLTNAEATAIAGSNPDYSQQDLFESIENSTYPGWIMYAQVLTPQQAETFKYNVLDLK
DWGFDDVPKTEIGRFYLTQNPVNYFAEIEQAAFSPGRTVSGWEPSTDPVLQARVFSYDAQRYRLGVNYQLPVNAPTSPVANFQRDGHMALSNQGSRPNYLSTLQKINLPPLPYIEDTHQQ
WGGAVKSLSEVTAIDFDWPQRFWKSLSEQDQTNFISNVVGHLGTVNSVSVRQRQVALFALVDPALGKAIADGVNVTVPNPLPSFPTGPTWFNTTKPATNSTLNY

Retrieve as FASTA  
Remarks Complete sequence from genomic (17 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCCGCATCACTCTCCGACGCGCTTTCGTCTCACTTGTCCTGGTGTGCGCCGCCGCACGCGCCCAGGACGCGTACACCTTCGACCTGAACACCGGCGTCGACCTCCAGGCGGCGACG
GACGCAGAGTCTGCGCCGCAGCTCACGTTCGCGACCGAGGCCGGCGTGCCCTACACGCACCCGTACGACGCGCAGAAGATCGGCGCCGACGCGGTGAGTCTCCTCATGGCTGTTGCTCGT
CCGCGCGCTTCTTCTCATGCGTCACGCTTGTGCAGGGCCTCTGCTCCTCCAGGACCAGCACATCATTGAGACTCTCGCCCATTTCGTGCGTGAGCGCATACCCGAGCGCGGTGAGCTTTG
CGAGCGAGCGGTCGTCCCTTCGACGTATGCTGACTTAGGGATCAAAGTGTCGTGCACGCGAAGGCGGCTGGCGCACATGGGTACTTTGAGGTCACGAATGCGGACTTTTTGTGAAGAATT
ACACAATCATGTGCGTGAAGCTTCTGGTGTGACTGCTCCTTTTATTTATCTAAACGCCCGATAGGGACGTATTTTCGGAGGTATGTATCGCAGTATCTGGTCTCTGGAAAGTACGGCAGA
AGGTCTAATCTTCGCAGAATGGCTTGAAAACCCCTATTACAGAGGTCTGTAGCTATTCATTTCCAATCGGGCCACCCTTGTTCATTTCGCTGTACTGTACTAGTCCGCATTAGCACCGTC
GGTGGAGAGATGGGCTCTGCGGACACAGCCAGAGACCCCCGTGGCTTTTCAGTGAAAAGTGAGTTTGTTTAATAATAGTCTTGACGATGGTGCTCAAAAATGGTAGATTTCGGACGCGTA
AGGGCATCTGGGACTTGGTCATGAACACAGTAGGTCCAGACTACCTTCGTAAACTTGGTAAACGCTCACATATTGCAGACACACCCGTATTCTTTATCCGGGACCCCACGAAGTTCCCGC
ACTTCATCCACACGTTCGTGCCTCCCTTGTTTTGCGAAGTTTTAAAATGTTTATCCTCCAACAGACCCAGAAACGTGACCCGCAGACCCACTTGCGCGATCACGAGAGTATGTGCAAATT
TCTCTGCCTGAGGCATAATACTGACGGGTCTTGGTAGCATGTATTGGGACTACCTGAGCTCGAACCCCGAGTCGCTCTACCAGGTGATGCGCCTGTTCTCGGACCTGGGCACGCCTGATG
GTGTGCGGCACCTGAACGCGTGGACGGGCCATTCCTACAGAGGTATAAAGCTATTTTCCTGTAATGTTAGCGCGCGTAGCTGATGTTGGTGCAGATGGATCAAGGCCGACGGCAGCTGGG
TCTACGTCAAGCTGTACTGCGAGACGATGCAGGGTGTGTATGCGCGCCATTTTCCGTCGCCGCTAACAAGCCTCACTGACGTCCTCATGCAGGTCCAGAACTTAACTAACGCAGAGGCGA
CGGCCATCGCGGGCTCAAACCCGGACTACTCCCAACAGGACCTGTTCGAATCAATCGAGAACAGCACATACCCCGGCTGGATCATGTATGCGCAAGTACTGACACCACAGCAGGCCGAGA
CGTTCAAGTACAATGTCCTTGACCTTACCAAAAGTATGTAGCACTACCGTCTCTCCCAGTCGGGTGTGGTCTGACACACGACCAGGGACTGGGGCTTCGACGACGTGCCTAAGACCGAGA
TCGGCCGGTTCTACCTCACGCAGAACCCAGTCAAAAGTGGGTCTTCGTTTTTGATCCCGAGATCGGGTGCTGATACGATCTTACAGCTACTTTGCTGAGATCGAACAGGCGGCCTTCTCT
CCTGGACGTACCGTCTCCGGATGGGAGCCTTCGACGGATCCGGTGCTCCAAGCTCGTGTGTTCTCTTACGGGGGGGTATGGAATCCGACGTTGGGTATATTAGAGATAAGCTGAAAAATC
GCGCTCAACAGATGCACAGCGCTATCGCCTTGGCGTGAACTATATGTGGTAAGTAATTTCCCCGTGATTCAGGGCTTTCTGTTCAACATCTTGACGTAGCAACTGCCCGTCAATGCGCCA
ACGTCGCCTGTTGTGGTGCGTAGCTCTGCTTCAGGATTACATTTATTGGCGGATGCTAACGGTTTATCGCAGCCAACTTCCAGCGTGATGGACACATGGCACTCAGCAATCAAGGCTCGC
GTCCAAACTACTTGTCTACTCTGCAGAAGATCAATCTTCCACCTCTGCCGTACATCGAGGATACTCACCAACAATGGGCTCTGTAAGTTGGGACAGCATCTCTGCTTTTCTTAGCTGACA
TGCAGCGCAGGGCGGTGCTGTCAAGTCCCTGTCCGAGGTGACTGCCATCGATTTCGACTGGCCGCAGCGCTTCTGGAAGAGCCTTTCTGAGCAGGACCAGACGAACTTTATCAGAGGTAC
GCACCCTCCCCGTACATACTTATACGGATTCTAGCTGAGGCTCTTATTCAGCAACGTCGTTGGACACCTTGGCACAGTCAACAGCGTGTCTGTCCGGCAGCGCCAGGTCGCGCTCTTTGC
GCTCGTCGACCCCGCGCTCGGCAAGGCCATTGCGGATGGTGTCAACGTCACGGTGCCCAACCCCCTGCCAAGCTTCCCCACAGGGCCCACCTGGTTCAACACGACGAAGCCTGCGACCAA
CAGCACGCTGAACTATTAG

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCCGCATCACTCTCCGACGCGCTTTCGTCTCACTTGTCCTGGTGTGCGCCGCCGCACGCGCCCAGGACGCGTACACCTTCGACCTGAACACCGGCGTCGACCTCCAGGCGGCGACG
GACGCAGAGTCTGCGCCGCAGCTCACGTTCGCGACCGAGGCCGGCGTGCCCTACACGCACCCGTACGACGCGCAGAAGATCGGCGCCGACGGGCCTCTGCTCCTCCAGGACCAGCACATC
ATTGAGACTCTCGCCCATTTCGTGCGTGAGCGCATACCCGAGCGTGTCGTGCACGCGAAGGCGGCTGGCGCACATGGGTACTTTGAGGTCACGAATGCGGACTTTAATGGCTTGAAAACC
CCTATTACAGTCCGCATTAGCACCGTCGGTGGAGAGATGGGCTCTGCGGACACAGCCAGAGACCCCCGTGGCTTTTCAGTGAAATTTCGGACGCGTAAGGGCATCTGGGACTTGGTCATG
AACAACACACCCGTATTCTTTATCCGGGACCCCACGAAGTTCCCGCACTTCATCCACACCCAGAAACGTGACCCGCAGACCCACTTGCGCGATCACGACATGTATTGGGACTACCTGAGC
TCGAACCCCGAGTCGCTCTACCAGGTGATGCGCCTGTTCTCGGACCTGGGCACGCCTGATGGTGTGCGGCACCTGAACGCGTGGACGGGCCATTCCTACAGATGGATCAAGGCCGACGGC
AGCTGGGTCTACGTCAAGCTGTACTGCGAGACGATGCAGGGTGTCCAGAACTTAACTAACGCAGAGGCGACGGCCATCGCGGGCTCAAACCCGGACTACTCCCAACAGGACCTGTTCGAA
TCAATCGAGAACAGCACATACCCCGGCTGGATCATGTATGCGCAAGTACTGACACCACAGCAGGCCGAGACGTTCAAGTACAATGTCCTTGACCTTACCAAGGACTGGGGCTTCGACGAC
GTGCCTAAGACCGAGATCGGCCGGTTCTACCTCACGCAGAACCCAGTCAACTACTTTGCTGAGATCGAACAGGCGGCCTTCTCTCCTGGACGTACCGTCTCCGGATGGGAGCCTTCGACG
GATCCGGTGCTCCAAGCTCGTGTGTTCTCTTACGGGGATGCACAGCGCTATCGCCTTGGCGTGAACTATATGCAACTGCCCGTCAATGCGCCAACGTCGCCTGTTGCCAACTTCCAGCGT
GATGGACACATGGCACTCAGCAATCAAGGCTCGCGTCCAAACTACTTGTCTACTCTGCAGAAGATCAATCTTCCACCTCTGCCGTACATCGAGGATACTCACCAACAATGGGCTGGCGGT
GCTGTCAAGTCCCTGTCCGAGGTGACTGCCATCGATTTCGACTGGCCGCAGCGCTTCTGGAAGAGCCTTTCTGAGCAGGACCAGACGAACTTTATCAGCAACGTCGTTGGACACCTTGGC
ACAGTCAACAGCGTGTCTGTCCGGCAGCGCCAGGTCGCGCTCTTTGCGCTCGTCGACCCCGCGCTCGGCAAGGCCATTGCGGATGGTGTCAACGTCACGGTGCCCAACCCCCTGCCAAGC
TTCCCCACAGGGCCCACCTGGTTCAACACGACGAAGCCTGCGACCAACAGCACGCTGAACTATTAG

Retrieve as FASTA