1. Browse the Database
  2. View Redoxidase
Entry information : EgrGPx06 ( Eucgr.E00579 / Egrandis_v1_0.024172m)
Entry ID 10165
Creation 2012-01-25 (Qiang Li)
Last sequence changes 2012-01-25 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-22 (Christophe Dunand)
Peroxidase information: EgrGPx06 ( Eucgr.E00579 / Egrandis_v1_0.024172m)
Name (synonym) EgrGPx06 ( Eucgr.E00579 / Egrandis_v1_0.024172m)
Class Plant glutathione peroxidase    [Orthogroup: Gpx2001]
Taxonomy Eukaryota Viridiplantae Streptophyta Myrtaceae Eucalyptus
Organism Eucalyptus grandis    [TaxId: 71139 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value EgrGPx06
start..stop		 S start..stop
EguGPx06 502 0 1..250 1..250
EglGPx06 405 3.03e-145 1..250 1..249
EguGPx07 392 5.29e-141 22..250 1..203
EgrGPx07 387 4.55e-138 1..250 1..244
Gene structure Fichierperl './assets/cgi-bin/draw_exon.pl' '10165' 'join(5521846..5522139,5522884..5522960,5523169..5523230,5523402..5523520,5523697..5523864,5523956..5523988)' Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 5521846..5522139 292 N° 2 5522884..5522960 75 N° 3 5523169..5523230 60 N° 4 5523402..5523520 117
N° 5 5523697..5523864 166 N° 6 5523956..5523988 31  
join(5521846..5522139,5522884..5522960,5523169..5523230,5523402..5523520,5523697 ..5523864,5523956..5523988)


exon

Literature and cross-references EgrGPx06 ( Eucgr.E00579 / Egrandis_v1_0.024172m)
DNA ref. Phytozome 12:   scaffold_5 (5521846..5523988)
Protein sequence: EgrGPx06 ( Eucgr.E00579 / Egrandis_v1_0.024172m)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   250
PWM (Da):   %s   27224  
PI (pH):   %s   9.35
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MLCSSTKALLLRCRNLRAPLASSSPSSSALPFPIPFSPSVAEQTLLSPRPISSLPAPGPPIKPPPPFGCRSFVSRDRRSSRAMASQSSKGSIYDFTVKDARGNDVDLGSYKGKVLLIVNV
ASQCGLTNSNYTELSQVYEKYKNGLEILAFPCNQFGAQEPGTNEQIVEFACTRFKAEYPIFDVDVNGENADPLYKFLKSSKGGLFGDNIKWNFSKFLIDKEGNVVDRYAPTTSPLSIEKD
IKKLLGVA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (scaffold_5, 5 introns).
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTCTGCTCCTCTACAAAAGCTCTGCTCCTCCGCTGCAGAAATCTCCGCGCCCCTCTCGCCTCCTCTTCTCCTTCTTCTTCTGCTCTGCCGTTTCCCATTCCCTTCTCTCCTTCGGTC
GCTGAGCAAACCCTTCTCTCCCCTCGCCCAATCTCGTCGCTCCCCGCGCCCGGCCCGCCGATCAAGCCGCCGCCGCCTTTCGGTTGTCGGAGCTTCGTCTCGCGCGATCGGAGATCGAGC
CGTGCCATGGCGAGTCAGTCCTCGAAGGGTTCGATTTACGACTTCACCGTCAAGAGGTCGGTTCTCTCTCGAGGTTTCCCTTTTGTGATTTCGCGGGGGAACTGTGAATCGGGAGTCGCC
CATCACCAGAAATGTCGACCCATATAATAAAGTTCGCCTTCTTTTTTTTTTCAAGTCATTTCTGAGCGAAGATTTTGTTTTTTTATATCCACAGCGACGCTTCGATTTTATGTAACTCAG
AAAGATGAAATTTTTATTCAATTGGTGTCGAGACTTTCTTGTAATCTATGTAAAGCTGAGGCCTTTTTCCAAAGCCCCGTATCAGAAATGTTAACCTCTATTATAAAGTTCGCCTTTCTT
TTTCTTTTTTTGGGTCATTTCTGAGCGAAGATTTTGTTTTTTTATATTCACAGCGACGCTTCGATTTTTCTAGCTCAGAAAGATGACATTTTTATTGAATTGGTGTCGAGACTTTCTTGT
AATCTATGTAAAGCTGAGGCCTTCCAAAGTTCTTTCTGTAGCCTTGTTTTTGGAGGTTTTTGAAAGTTTAGGTGGTAATCTGAAAATGGACCAATCTACAGCACCTTTGATGTATAAGTT
TCCCTTTTATCTATGTAATTCGCTCAAATATCGGATTTTGTTGATTCAAATATCGAGTTTTGAGTAAGTTGTTGGGGTAAGTTGGTCAGGGAGCGAGATCATGTGTGTCGTGCCGTGTGC
TGAGAGGTTGTGAATCATTTGAGGACCATGATGTTATGCTGTGCTGAGACTTGGAGATTCGGGTTCCTTTTTTTATTCAGGATGCTCGAGGAAATGATGTCGATCTCGGTTCCTACAAGG
GCAAGGTCTTGCTGATTGTCAACGTCGCTTCGCAGTGTGGTAATTCTCAGGATTGTGTTTATGCCCCGTAACAGGGAACATCTGGTTGGACTTTAATCTTGGCCGATCTGGTTAAAAGCA
ATATCATATTTCATGCCTTTTATCATTTGGAATTCTTTATGCAATTCAGCTTGGGAGTAGCTCAGTGTTTTAGTAATCGGGTTGGTCCACCATGTTCTAATTTTTTTTATCGGTATGTTT
GTTGCAGTGGACTGACCAATTCAAACTACACTGAACTCAGTCAGGTCTATGAGAAATACAAGAATCAAGAGGTCTCCTATGCCTCCCCTGATGCCCCATAGTATCTTGTGTTTTAGTGGA
ATCCTGGCCTTAACAGGATAATAAAGATATATCGTATCAGAAAAAGCAGTTGGTTATTGGTATCACTTAGCATATGGAGATTCTAGAAAATTTAAAGAGGATGTCACTCTGATGTGATGC
AGGGTTGGAGATATTAGCATTCCCATGCAATCAGTTTGGAGCTCAGGAGCCGGGGACAAATGAGCAGATCGTAGAATTTGCTTGCACTCGATTCAAGGCTGAATATCCCATTTTTGATAA
GAGGTAAAAGATATACATGAGGTCCTTCTCTGAAGATGAAGAGCATATGGTGAACTATCTCTCAAGAGTTTTTTGGAGTCGTATCTGCAGTTCCCTTATATTTCCTAGCAACTGGCAATT
TGCAGTTTGAATTTAAAAAAAAAAAGTGAGGATGAAGAATCTGATTGCTTTTTCTATAGGTTGATGTGAATGGTGAAAATGCTGATCCTCTTTACAAGTTCCTGAAATCAAGCAAGGGCG
GACTCTTTGGGGATAACATTAAGTGGAACTTCTCCAAGTTCCTCATCGATAAAGAAGGAAATGTCGTCGATCGCTATGCACCCACTACTTCTCCTCTTAGCATCGAGAGGTGAGAGTCTA
CTCTTTGATGATCATAGTCGAAGTTTGTTGACTTTTTTTTTGGCTATTTGACTGAGGCATTGCGGTTGTTATTGTCGCAGAAGGACATCAAGAAACTGTTGGGAGTGGCATGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGCTCTGCTCCTCTACAAAAGCTCTGCTCCTCCGCTGCAGAAATCTCCGCGCCCCTCTCGCCTCCTCTTCTCCTTCTTCTTCTGCTCTGCCGTTTCCCATTCCCTTCTCTCCTTCGGTC
GCTGAGCAAACCCTTCTCTCCCCTCGCCCAATCTCGTCGCTCCCCGCGCCCGGCCCGCCGATCAAGCCGCCGCCGCCTTTCGGTTGTCGGAGCTTCGTCTCGCGCGATCGGAGATCGAGC
CGTGCCATGGCGAGTCAGTCCTCGAAGGGTTCGATTTACGACTTCACCGTCAAGGATGCTCGAGGAAATGATGTCGATCTCGGTTCCTACAAGGGCAAGGTCTTGCTGATTGTCAACGTC
GCTTCGCAGTGTGGACTGACCAATTCAAACTACACTGAACTCAGTCAGGTCTATGAGAAATACAAGAATCAAGGGTTGGAGATATTAGCATTCCCATGCAATCAGTTTGGAGCTCAGGAG
CCGGGGACAAATGAGCAGATCGTAGAATTTGCTTGCACTCGATTCAAGGCTGAATATCCCATTTTTGATAAGGTTGATGTGAATGGTGAAAATGCTGATCCTCTTTACAAGTTCCTGAAA
TCAAGCAAGGGCGGACTCTTTGGGGATAACATTAAGTGGAACTTCTCCAAGTTCCTCATCGATAAAGAAGGAAATGTCGTCGATCGCTATGCACCCACTACTTCTCCTCTTAGCATCGAG
AAGGACATCAAGAAACTGTTGGGAGTGGCATGA

Retrieve as FASTA