Sequence Properties
first value : protein second value (mature protein) |
Length (aa): |
243 |
PWM (Da): |
26471.61 |
Transmb domain: |
i245-264o331-353i381-403o429-451i617-634o |
PI (pH): |
9.03 |
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Sequence
Send to BLAST
Send to Peroxiscan
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
MLCSFATALL LRCRNLRAPL ASSSSSPSSA LPFPIPFSPS VSKQTLLFPR PISSRPEPRA PIKPPPFGCR SFVxRAMVSQ SSKGSIYDFT VKDARGNDVN LSFYKDKVLL IVNVTSQCGL
TNSNYTELNQ IYEKYKNQGL EILAFPCNQF GAQEPGTNEE ILEFACARFK AECPIFGNVD VNGENAAPLY KFLKSSKGGL FGDNIK*NFS KFLIDKEGNV VDHYAPTTSP LSIEKDIKKL
LGVA
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Retrieve as FASTA
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Remarks |
Complete sequence from genomic. No prediction from Phytozome. A stop in frame maybe due to bad sequencing. |
DNA ►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCTCTGTT CCTTTGCAAC AGCTCTGCTC CTTCGCTGCA GAAATCTCCG CGCGCCTCTC GCTTCCTCCT CTTCTTCTCC TTCTTCTGCT CTGCCGTTTC CCATTCCCTT CTCTCCTTCG
GTCTCGAAGC AAACTCTTCT CTTCCCTCGC CCAATCTCGT CGCGCCCCGA GCCCCGCGCG CCGATCAAGC CGCCGCCTTT CGGTTGTCGG AGCTTCGTTC nnCGTGCCAT GGTGAGCCAG
TCCTCGAAGG GGTCGATTTA CGACTTCACT GTCAAGGTCG GTTCGCTCTC GAGGTTTCGC TTTTGCAATT TCGCGGGGGA ATTGTGAATC GGGAGTCGCC CATCGGCAGA AATGTCGACC
CATATCATAA AGTTCGCCTT TTTTTTAAGT CATTTCTGAG CGAAGATTTT GTTCTTTTAT ATCCACAGCG ACGCTTCGAT TTTTTTTAGC TCCGAAAGAT GACATTTTTG TTCAATTGGT
GTTGAAATTC TTGTAATCTA TGTGAAGCTG AGGCCTTTTT CCAAAGCCCC ATCATCAGAA ATGTTAACCT CTATTATAAA GTTCGCCTTT TTTTTTTTTT TGGGTCATTT CTGAGCGAAG
TTTTTTTAGC TCAGAAAGAT GGCATTTTTA TTCAATTGGT GTTGAAACTT TATTGTAATT TATGTAAAGC TGCGGCCTTT TTTCCAAAGC TTTTCTTTAG CCTTGTTTTT TTGGAGGTTT
TTTAAAGTTC AGATGGTTAA TCTGAAAATG GACCGATGTA CAGCGCCTTT GATGTATAAG TTTCCCTTTT ATCTATGTAA TTCGCTCAAA TATCGGATTT TGTTGATTCA AATATCGAGT
TTTGAGTAAG TTGTTGGGGT AAGTTGGTCA GGGAGCGAGA TCATGTGTGT CGTGCCGTGT GCTGAGAGGT TGTGAATCAT TTGAGGACCA TGATGTCTTG CCGTGCTGAG ACTTAGAGAT
TCGGGTTCCC TTTTTCATTC AAGATGCTCG AGGAAATGAT GTCAATCTCA GTTTCTACAA GGACAAGGTC TTGCTGATTG TCAACGTCAC TTCGCAGTGG TAATTCTCAG GATTGTGTAT
ATGCCCTGTA ACAGGGAACG TATGCTTGGA CTTTAATCTT GGGCGATCTG CTTAAAAGCA TATCTATATT TCATGCCTTT GGTCATTGAG AATTCTTTAT GCCATTCAAC TTGGGAGCAG
CTTAGTGTTT TAGTAATCGG GTTGGTCCAC CATGTTCTAA TTTTTTTTTT AATTGATATG TTGTCTGTTG CAGTGGACTG ACCAATTCAA ATTACACCGA ACTCAATCAG ATCTATGAGA
AATACAAGAA TCAAGGTCTC GTATGCCCTC CCCTGGTCCT GATATCCCAT CGTATCTCGT GTGCCAGTGG AATACTGGCC TTAAAATGAT AATAAACATA TATTGTTTCA GAAATAACAA
TTGGTTATTG GTATCACTTG GCATGTGGAG ATTCTAGAAA ACTTAAAGAG GATGTCACTC TGATGCGATG CAGGTTTGGA GATATTAGCA TTCCCGTGCA ACCAGTTTGG AGCTCAGGAG
CCAGGGACAA ATGAGGAGAT CCTAGAATTT GCTTGCGCTC GATTCAAAGC TGAATGTCCC ATTTTTGGTA ATGTAAAAGA AATACATGAC GTCCTTCTTT GACGGTGATG GAGTTGTATC
TGCAGTTCCT TCATATTTCC TGGTGACTGC TAATTTGCAG TTTGAGTTAT AAAAAATGAA ATGAGGATGA AGAATCTGAT TGCTTTTTCT ATAGGTTGAT GTGAATGGTG AAAATGCTGC
TCCTCTCTAC AAGTTCCTGA AATCAAGCAA GGGAGGACTC TTTGGGGATA ACATTAAGTA GAACTTCTCC AAGTTCCTCA TCGATAAAGA AGGAAATGTC GTTGATCATT ATGCCCCCAC
TACTTCTCCT CTTAGCATTG AGGTAAGACT CTGATCGGCA ACGTTCAAAG TTGAAGTGTG TTGACTTCTT TGGCTATTTG ACGGAGGCAT CGCAGTTGTT CTTAATGCAG AAGGACATCA
AGAAACTGTT GGGAGTAGCA
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Retrieve as FASTA
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CDS►
Send to BLAST
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2 |
ATGCTCTGTT CCTTTGCAAC AGCTCTGCTC CTTCGCTGCA GAAATCTCCG CGCGCCTCTC GCTTCCTCCT CTTCTTCTCC TTCTTCTGCT CTGCCGTTTC CCATTCCCTT CTCTCCTTCG
GTCTCGAAGC AAACTCTTCT CTTCCCTCGC CCAATCTCGT CGCGCCCCGA GCCCCGCGCG CCGATCAAGC CGCCGCCTTT CGGTTGTCGG AGCTTCGTTC nnCGTGCCAT GGTGAGCCAG
TCCTCGAAGG GGTCGATTTA CGACTTCACT GTCAAGGATG CTCGAGGAAA TGATGTCAAT CTCAGTTTCT ACAAGGACAA GGTCTTGCTG ATTGTCAACG TCACTTCGCA GTGTGGACTG
ACCAATTCAA ATTACACCGA ACTCAATCAG ATCTATGAGA AATACAAGAA TCAAGGTTTG GAGATATTAG CATTCCCGTG CAACCAGTTT GGAGCTCAGG AGCCAGGGAC AAATGAGGAG
ATCCTAGAAT TTGCTTGCGC TCGATTCAAA GCTGAATGTC CCATTTTTGG TAATGTTGAT GTGAATGGTG AAAATGCTGC TCCTCTCTAC AAGTTCCTGA AATCAAGCAA GGGAGGACTC
TTTGGGGATA ACATTAAGTA GAACTTCTCC AAGTTCCTCA TCGATAAAGA AGGAAATGTC GTTGATCATT ATGCCCCCAC TACTTCTCCT CTTAGCATTG AGAAGGACAT CAAGAAACTG
TTGGGAGTAG CA
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Retrieve as FASTA
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