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Entry information : LuAPx-R01(Lus10002916|PACid:23148599)
Entry ID 12008
Creation 2013-05-28 (Qiang Li)
Last sequence changes 2013-05-29 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2023-01-24 (Christophe Dunand)
Peroxidase information: LuAPx-R01(Lus10002916|PACid:23148599)
Name LuAPx-R01(Lus10002916|PACid:23148599)
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Streptophyta Linaceae Linum
Organism Linum usitatissimum (flax)    [TaxId: 4006 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LuAPx-R01
start..stop		 S start..stop
RcAPx-R 395 5.45e-139 36..316 44..327
PtAPx-R 389 1.19e-136 20..316 30..336
VvAPx-R 389 1.23e-136 12..316 9..329
MeAPx-R 388 6.04e-136 41..316 57..334
Literature and cross-references LuAPx-R01(Lus10002916|PACid:23148599)
DNA ref. Phytozome 12:   scaffold3059 (77146..75355)
Protein sequence: LuAPx-R01(Lus10002916|PACid:23148599)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   317 (245)
PWM (Da):   %s   34311.41 (24909.6)  
PI (pH):   %s   5.86 (3.63) Peptide Signal:   %s   cut: 23 range:23-267
Sequence
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*.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKPLAISRLK LSLFHSNSFF SSSPTLKFPS AVDVRCKSVR DSDAGEDCDW VSGGRRRMLV SISTLPFLTG LQFNASATDE LGLDASGLIR EEARKVVTKG RAAGVLRLAF HDAGTFDISE  KSGGMNGSII YELGRPENTG LNKSVKVLEK AKSVVDSRLP VSWADMIALS GAEAVSICGG PSIPLRIGRL DSMEADAEGR LPEETLDAPG LKQSFRSKGL STQELVALSG AHTLGSKGFG 
NPIVFDNSYY KILLEKPWMS SVGMTNMVGL PSDRALVEDD ECLRWIEVYA GDEEMFFQDF KTAYTKLVNS GAMWKSA* 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 2 ESTs. Incorrect prediction.(splicing error confiirmed with EST (JG115870.1)
DNA ►
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAAACCTT TAGCAATATC CCGCCTCAAG CTTTCTCTAT TCCACTCCAA TTCCTTCTTC TCTTCATCTC CAACACTCAA ATTTCCCTCC GCCGTCGATG TCCGCTGCAA ATCCGTCCGA  GACAGTGATG CTGGTACTCA CAAGTTTTCC CCGCTTTTTA GCTGTGTTCA TCACTGGGTT TTGTTCACAA TTTGTCAACT TTAACTGCTG CAGGGGAGGA TTGTGATTGG GTTTCAGGTG  GACGCAGGAG AATGCTCGTC TCCATTTCCA CGCTTCCGTT TCTAACTGGT TTGCAATTCA ATGCCAGTGC CACTGACGAG TGAGTTTCTG TATTCAAGAT GTAGACTTTC TATGAACTGG  GGAACCAACC ATGCTTAGGT TTGAGATAGG TGATAACTGA GTATTGGATT GTATGTATCT CACAAGCTTG TGAGCTTAAT TGTTGCATGG TAGTGTCTGC CAATTGCCAT GACAAATAAT  CCATGAGTTC AATCTTTGCT GCTATTGGTG AAAAAGGTTA GGCTTGGATG CTAGTGGGCT GATAAGGGAA GAGGCAAGGA AAGTAGTGAC AAAGGGCAGG GCTGCTGGCG TGCTTCGTCT  TGCCTTTCAT GATGCAGGAA CCTTTGACAT CAGTGAGAAA TCAGGTAATG TCTAGTTGTT AACAGTGAAA TGGTTTGATT GATGCTCCTG AAGGACAGGG ATTTGGTGAA CTCTACGCTG  TTCTTAGTTT CGGATTTCTG TTACTGTAGG CGGTATGAAC GGTTCGATAA TCTACGAGCT CGGAAGGCCT GAAAATACTG GTTTAAACAA GTCAGTGAAG GCAAGTTCTC TCACTATCCA  ACTCTTCAAA GGATAGCATG CTTAGATGGA ATGTATGTAC TTGTACTCAT TCAACGCAGC AAGGCTAATT CCCGAGCCGG TGTGTTCTGG TTTTTAGGTT CTCGAAAAGG CAAAGAGCGT  AGTGGACTCG AGACTGCCAG GTTCATATTC AAATGTCCAA GTGAAAACAA CAAAAAGGAA CGAATATTTT TTCCATAATT GAAGACATGG CCCCTAATGT GTGAGCTTTT TATCTGTCAG  TATCCTGGGC AGACATGATT GCTCTTTCTG GAGCTGAAGC AGTTTCCATC TGTGGTGGTC CTTCAATCCC CCTTCGAATC GGCAGACTGG ATTCAATGTA CGTAATGGAG TTCATACTCT  TGCTTGTTTT TTTTCTTCCC GATCCATTGT TCTTCAATGC AGGGAAGCTG ATGCAGAAGG CAGACTTCCT GAAGAAACAT TGGATGCTCC TGGTTTGAAG CAATCCTTCC GAAGCAAAGG  CCTATCGTGA GTCGAAAAAG CAAAAAACCG TCCAATCCAT ATCTGCTCGA AACGAGCTGG GACATTTACA TCCTCGATTT CCTTTTATAG GACGCAAGAA CTTGTTGCAT TGTCTGGAGC  TCATACTCTT GGCAGTAAAG GATTTGGGAA CCCAATCGTC TTCGACAATT CTTACTACAA AATCCTTCTT GAGAAGCCAT GGATGTCCTC GGTTGGCATG ACGAACATGG TGGGGCTTCC  TTCGGACCGT GCACTTGTCG AAGACGATGA ATGTCTAAGG TTTTGATCAT GGAATGACCA GCCAGTATAA AAAAACCATT ATATTAATGA TTTCTTTTTC TAATTTGGAT TGGATAATCT 
TGTTAACAGA TGGATAGAAG TGTATGCGGG TGATGAGGAG ATGTTCTTCC AAGATTTCAA GACTGCATAT ACCAAACTTG TGAACTCTGG CGCAATGTGG AAAAGCGCTT AG 

Retrieve as FASTA