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Entry information : MtPrx16 (Medtr2g029750.1 [4.0] / Medtr2g029750.1 [3.5])
Entry ID 343
Creation 2006-01-18 (Christophe Dunand)
Last sequence changes 2010-09-14 (Haythem Mhadhbi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2014-07-16 (Christophe Dunand)
Peroxidase information: MtPrx16 (Medtr2g029750.1 [4.0] / Medtr2g029750.1 [3.5])
Name (synonym) MtPrx16 (Medtr2g029750.1 [4.0] / Medtr2g029750.1 [3.5])
Class Class III peroxidase    [Orthogroup: Prx048]
Taxonomy Eukaryota Viridiplantae Streptophyta Fabaceae Medicago
Organism Medicago truncatula (barrel medic)    [TaxId: 3880 ]
Cellular localisation N/D
Tissue types Cell culture
Roots
Inducers Aphanomyces euteiches zoospores infection
Elicitor treatment (glucan, oligosaccharides, yeast extract, Phytophthora crude extract)
Glomus versiforme infection
Meloidogyne incognita
Mycorrhiza
Nodulation
Pathogen interaction
Phytophthora infection
Sinorhizobium inoculation
Repressor N/D
Best BLASTp hits
Perox score E-value MtPrx16
start..stop		 S start..stop
MtPrx17 622 0 1..354 1..355
MtPrx71 559 0 1..354 1..355
PsPrx13 549 0 1..354 1..357
MtPrx10 536 0 1..354 1..353
Gene structure Fichier Exons►


exon

Literature and cross-references MtPrx16 (Medtr2g029750.1 [4.0] / Medtr2g029750.1 [3.5])
Literature Torres-Jerez,I. et al., unpublished
DNA ref. Phytozome 12:   chr2 (11117725..11119436)
Cluster/Prediction ref. Phytozome Gene 12:   31065879 UniGene:   Mtr.15555
Omic ref. Gene atlas:   Mtr.10356.1.S1_at Legoo:   Mtr.10356.1.S1_at
Protein sequence: MtPrx16 (Medtr2g029750.1 [4.0] / Medtr2g029750.1 [3.5])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   354 (327)
PWM (Da):   %s   38170.29 (35475.9) Transmb domain:   %s   i2-24o
PI (pH):   %s   7.6 (7.68) Peptide Signal:   %s   cut: 28 range:28-354
Sequence
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MNSLSLIATALCCVVVVFGGLPFSSNAQLSPDFYAKTCPQLQSIV
FQILEKVSKTDSRMPASIIRLHFHDCFVQGCDASVLLNKTSTIASEQDAGPNINSLRRLDVINQIKTEVEKVCPNKVSCADILTLAAGVSSVLSGGPGWIVPLGRRDSLTANQSLANRNLPGPSSSLDQLKSSFAAQGLNTVDLVALSG
AHTLGRARCLFILDRLYDFDNTGKPDPTLDPTYLKQLQKQCPQNGPGNNVVNFDPTTPDKFDKNYYNNLQGKKGLLQSDQELFSTPGADTISIVNNFGNNQNVFFQNFINSMIKMGNIGV
LTGKKGEIRKQCNFVNKKSSELDLASVTSESMEGDMVSSI

Retrieve as FASTA  
Remarks Complete sequence from 73 ESTs and genomic sequence (chromo 2, 3 introns)
DNA ►
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cDNA►
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