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Entry information : CreAPx-R (Cre06.g285150.t1.1)
Entry ID 7433
Creation 0000-00-00 (Christophe Dunand)
Last sequence changes 2011-04-11 (Catherine Mathe)
Sequence status complete
Reviewer Qiang Li
Last annotation changes 2011-12-15 (Qiang Li)
Peroxidase information: CreAPx-R (Cre06.g285150.t1.1)
Name (synonym) CreAPx-R (Cre06.g285150.t1.1)
Class Ascorbate peroxidase related    [Orthogroup: APx-R001]
Taxonomy Eukaryota Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadaceae Chlamydomonas
Organism Chlamydomonas reinhardtii    [TaxId: 3055 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CreAPx-R
start..stop		 S start..stop
VcaAPx-R 346 2.86e-119 52..337 40..324
CvarAPx-R 271 9.18e-90 69..337 81..350
CsorAPx-R 267 1.36e-88 111..337 97..319
OCgAPx-R02 258 1.83e-86 121..332 1..209
Gene structure Fichier Exons►
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 4209763..4209886 122 N° 2 4209317..4209540 222 N° 3 4208686..4208832 145 N° 4 4208241..4208493 251
N° 5 4207936..4208033 96 N° 6 4207406..4207483 76 N° 7 4207005..4207094 88  
complement(join(4207005..4207094,4207406..4207483,4207936..4208033,4208241..4208 493,4208686..4208832,4209317..4209540,4209763..4209886))


exon

Literature and cross-references CreAPx-R (Cre06.g285150.t1.1)
DNA ref. Phytozome 12:   chromosome_6 (4209886..4207005)
EST ref. GenBank:   BI718422.1 [5' end]  BI995259.1 [3' end]
Cluster/Prediction ref. UniGene:   Cre.3578
Protein sequence: CreAPx-R (Cre06.g285150.t1.1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   337 (685)
PWM (Da):   %s   35018.22 (74512.6)  
PI (pH):   %s   8.97 (5.78) Peptide Signal:   %s   cut: 21 range:21-705
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSTSVLSHRSLSNCTRHGNPRRACRVATHAKLRDLSQWRQEGSGTSEPAVAPELSRRAVLKLGAALPALAAALAAATPPALLLAPLPAAAEGPTLPSPAVAAALDKALAKNIPKTTAVALRLAFHDAATFSAGAKDGGLNASIQYELDRPENFGLKRGWRI
IEQVRADLKGTAAEGVVTDADLVALAGAFAVRLCGGPAIPLPIGRPVAAAARQDPPGRMPSENASAAELKANFAAKGLSVQEMVALSGAHTLGSKGFGDPVTFDNAYYVALLQKPWNNTD
AMASMIGLPSDHVLPDDPDCLPVIQRYAADQDLFFRDFSAAYIKMCGLGVAGWA*

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 6, 7 introns) and 19 ESTs.
DNA ►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGTACAAGCGTCCTTTCGCACCGTTCCCTGTCGAATTGCACACGCCATGGCAACCCGCGACGAGCGTGCAGAGTTGCGACGCATGCCAAGCTACGGGACCTGTCACAGTGGCGCCAA
GAGGGTGCGTGGCGGATGTTCGATGGGCCGCAGCTCGGGCGTAACTGTACCCCTCGGGATGGTACCCGTGGCCACGATGCCCCGCCGGCAACTGGCGCATGCACCGGAGGGAGGCGAGCG
CAGGGGATGCGAGCTCTTAGATAGCTAGTAACTAGTACGTACGTCGTTGCCTGCCGTCACGGTCGCGCCCCGGGCATCGCGGTTGCGTCACGCCTGACTAGGACAGGCGCAGCGGTACCT
CGGAGCCGGCTGTAGCTCCGGAGCTTTCGCGACGAGCGGTGCTGAAGCTGGGGGCGGCACTGCCGGCCCTGGCGGCGGCTCTGGCCGCGGCCACCCCGCCGGCGCTGCTGCTGGCGCCAC
TGCCGGCCGCCGCCGAGGGGCCGACGTTGCCGTCTCCGGCCGTGGCGGCTGCGTTGGACAAGGCTCTTGCTAAGAACATCCCCAAGACGAAGGTGCGTGAGAGGGTGCGAGTTACGAGGA
CCAAATTTGCAAGGGTGTGCAACAGTGGCGGGTCTACTTGGGGCAGTGGGGGAAGCAGGGCGCAGCGGGTGGGCGAGGCAGGACGGTGCCACTTTGCGGAGGCACGGCACGGCGCCTCAG
GGCCGCGCTGGTGAGTGGTGCCCCCACCATCCCGGTCCGGTGTTGGTGATCTGGATGCGGCTCAGTTCGCATGATGCGCCCGGATGCCCTCTGTTGCTCCCCCTACTCCATGAACCTTGA
TATGTGTGGTCTCGCGGCCTCCTGCCCCCCGGCACCGCCAACCCGTACCCACCCCAATCTCCTGTTCCCTGCTCCACGGCTCACACACACACACACACACACACACACACACACACACAC
ACACACACACACACACACACACACACACACACACACACACACACATGCACATGCACACACACGCACACGTTCCCCTTGTGCTCTCCGCACGCACAGACACTGCTGTGGCTCTGCGCCTGG
CCTTCCACGACGCCGCCACCTTCAGTGCGGGCGCCAAGGACGGCGGCCTGAACGCCTCCATCCAGTACGAGCTGGACAGGCCCGAGAATTTCGGGCTCAAACGCGGCTGGCGCATCATTG
AGCAGGTGTGCGTGCGGGGGCTATGCGGGGGCGGGCGATGGCAATCAATTTTACCATTTGCAATAAGCGACAAGCGGCATGAAAGAAGCAGAACAGCAGCCGAGGGTGGGGCTGTTTTCC
CAGCCTCCAGATAGATCCAGTGCCGCCAACCCACTCCCCTCTCCTCCCCTCGCCACCGCCACCCCCCCCCCCTCCAGGTGTGCGCGCGGACCTAAAGGGCACGGCGGCGGAGGGCGTGGT
GACCGACGCCGACCTGGTGGCCCTGGCCGGCGCCTTCGCGGTGCGGCTGTGCGGCGGCCCTGCCATCCCACTGCCCATCGGCCGCCCGGTGGCGGCGGCCGCCCGCCAGGACCCGCCTGG
CCGCATGCCGTCCGAGAACGCCAGCGCGGCCGAGCTCAAGGCCAACTTCGCGGCCAAGGGGCTGAGCGTGCAGGAGATGGTGGCGCTGTCAGGTGAGGGGGAGAGAGGGAGGGCGAGGGA
GGGGGGAGGAAGGGGGAGGAAGGGGGAGGAGGGGGGAGGGCGTGGGAGGGCATGGGGAATGGGGGAGGAATTGGGGGTGGGGAAGGGGGGAGGGCTCTGCTCCTCGGGCCCACCCTCTCA
CCCAGCCAAGCCACACACACCACCGGCGCCATCTTAAGGTCCGCCACTCCACCACGCAGGTGTGCTCACACGCTGGGCAGCAAGGGCTTTGGCGACCCGGTCACCTTTGACAATGCCTAC
TACGTGGCGCTGCTGCAGAAGCCCTGGAACAACACAAAGGTGCGCGGGAGGGCGGGGGCGGCTGCGGGGAGGGCGGGGGCGGCTGCGGGGAGGGCGGGGGCGGCTGCGGGGCGGGCGGGG
GCGGGGGCGGAAATGGCGGCTGGGGCGGGCGGGGTTGCGGGGGTTGCACACACGGGCGTGTGGTTGCATCACGTCTTGTGTGGCACCTTCCGCGCCTGATGCCTCCAGCCGCCGCCGGTG
GGTGTCTTCATCCGCCACGCCAGGCAGCACCCGGGCCTGGGCGCCTCCCACTGCTCCCCTCCGCCTTTGTCGCCTACCGTGTTGCAACATCCCACCTTTTCCCTGTCCGCCCGCCAATCC
GCACGCCCTCCCGCCCGCCTGTTGTGTATGCCACCTCCCCCCTTGCGATTCTTCACTTGAACGACTACCTCGCTACGCTTCCCTGTAACATCTTGCAACCCCCACACGCCACGCCCACCC
CACCCCCTCAGGAGACGCCATGGCCTCCATGATCGGGCTGCCCTCCGACCACGTGCTCCCTGACGACCCGGACTGCCTGCCCGTCATCCAGGTGGGTGGGGCCCTCAGGGGCCGCAGGGG
CCCTCAGGGGCCGCAGGGGCCGCAGCGGCCGCAGGGGCCGCACGGGCCTGTGGGTGTGTTGGCCGCTGGCCAGAGAGGAGCTGCAGCAAGGCTTGAGGTTGGGTGCATGCCCAGCCGCTC
ACGCCTGGCAGGTGCCTTCCCCCAGGCCCCGCCTCCGCAATGCGCCCTCCGCTGCTCCTCCTGCCCCCACCCCCCACGCGCGCTATACTAACTGTTCGTGGCTATGCCTTCACTTCTTAA
ATCATCATTGAATGTACCCCCCCCCATACACACACTGCGCAGCGCGTTACGCGGCGGACCAGGATCTGTTCTTCCGCGACTTCTCCGCCGCCTACATCAAGATGTGCGGGCTGGGCGTGG
CGGGCTGGGCGTGA

Retrieve as FASTA  
CDS►
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAGTACAAGCGTCCTTTCGCACCGTTCCCTGTCGAATTGCACACGCCATGGCAACCCGCGACGAGCGTGCAGAGTTGCGACGCATGCCAAGCTACGGGACCTGTCACAGTGGCGCCAA
GAGGGCAGCGGTACCTCGGAGCCGGCTGTAGCTCCGGAGCTTTCGCGACGAGCGGTGCTGAAGCTGGGGGCGGCACTGCCGGCCCTGGCGGCGGCTCTGGCCGCGGCCACCCCGCCGGCG
CTGCTGCTGGCGCCACTGCCGGCCGCCGCCGAGGGGCCGACGTTGCCGTCTCCGGCCGTGGCGGCTGCGTTGGACAAGGCTCTTGCTAAGAACATCCCCAAGACGAAGACTGCTGTGGCT
CTGCGCCTGGCCTTCCACGACGCCGCCACCTTCAGTGCGGGCGCCAAGGACGGCGGCCTGAACGCCTCCATCCAGTACGAGCTGGACAGGCCCGAGAATTTCGGGCTCAAACGCGGCTGG
CGCATCATTGAGCAGGTGCGCGCGGACCTAAAGGGCACGGCGGCGGAGGGCGTGGTGACCGACGCCGACCTGGTGGCCCTGGCCGGCGCCTTCGCGGTGCGGCTGTGCGGCGGCCCTGCC
ATCCCACTGCCCATCGGCCGCCCGGTGGCGGCGGCCGCCCGCCAGGACCCGCCTGGCCGCATGCCGTCCGAGAACGCCAGCGCGGCCGAGCTCAAGGCCAACTTCGCGGCCAAGGGGCTG
AGCGTGCAGGAGATGGTGGCGCTGTCAGGTGCTCACACGCTGGGCAGCAAGGGCTTTGGCGACCCGGTCACCTTTGACAATGCCTACTACGTGGCGCTGCTGCAGAAGCCCTGGAACAAC
ACAAAGGACGCCATGGCCTCCATGATCGGGCTGCCCTCCGACCACGTGCTCCCTGACGACCCGGACTGCCTGCCCGTCATCCAGCGTTACGCGGCGGACCAGGATCTGTTCTTCCGCGAC
TTCTCCGCCGCCTACATCAAGATGTGCGGGCTGGGCGTGGCGGGCTGGGCGTGA

Retrieve as FASTA